PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62000493-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 330aa    MW: 36054.7 Da    PI: 4.9212
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62000493-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM147.37.8e-46111372128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      pG+rFhPtdeel ++yLk+kv gk+l   ++i+e+d+yk+ePwdLp  +++k++++ wyfF++r+kky++g r +r+t++gyWk+tg+d + + 
  AUR62000493-RA  11 LPGVRFHPTDEELFMFYLKRKVLGKSLGP-QMISEIDVYKFEPWDLPamAHLKTKDRYWYFFCPRSKKYPSGGRVSRTTNRGYWKSTGTDSPTKY 104
                     69************************988.88***************5337888999************************************99 PP

             NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +++vg  ktL+f+ g+apkge+t+Wvmhey l
  AUR62000493-RA 105 -ASRDVGKIKTLIFHMGKAPKGERTNWVMHEYIL 137
                     .9999***************************76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MEELLFNKSF LPGVRFHPTD EELFMFYLKR KVLGKSLGPQ MISEIDVYKF EPWDLPAMAH  60
LKTKDRYWYF FCPRSKKYPS GGRVSRTTNR GYWKSTGTDS PTKYASRDVG KIKTLIFHMG  120
KAPKGERTNW VMHEYILADK LLADKGVPQD SYAICKIFEK SGAGPKNGED YGARFIEEEW  180
DSDNEDNVQG RKSGLEKGCG FVDNSPFVAD SVISLSSGAP KDSSPVGPPF TAAAAEEPSP  240
FTAAVTTPYI AAATSLDVPN AAPLLSTSVS KASAASVERA SILPTSEDEL DRLLECFSED  300
AADADIFTGL GDLGDPSDWG SVLILVSLK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64060.17e-73NAC family protein