PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62000483-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 779aa MW: 84675.7 Da PI: 6.9927

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62000483-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.8	6.1e-16	488	534	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+k Lq AUR62000483-RA 488 VHNLSERRRRDRINEKMRALQELIPNC-----NKADKASMLDEAIEYLKTLQ 534 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 779 aa Download sequence
MPMKMVDCII DDGVSVVDSV LSDGLGFARR EVYVVKDTIL VCNMPLTELV RMFKGKVDVT 60 NEVASTSIDP SSRPDTDCVE LIWENGQIMM QGNKARKSTN SNNFQTFGLK SQDGRNGTNC 120 SKMAKFSTMD SVMSDFPMSV PSCEMGLDQD IDLVPWLNYP MEESLHNDYT SDFLNELSGV 180 TINDLPTENH LAYRERKISF HGDGHDNSAS LKHNDTSKDF SSNEKDNRGG SIEVPQFMFP 240 FQQSVPRSGI SDITGSNAGN THHVGSRDSG LNPSSLSAFT SLRLQKLDAG QPSTTSSGFT 300 NFPCFSRPAA LSRANHVSVN PSKRLENGNK RCTLSSSYPA NSTLVNLDSN YSQKELLSHN 360 QSIMAPTNDK SITLPTKPPT EELLSANQPM CREDTAKNQA SQNQVCDSPM SKVGTIGNKI 420 MEPVVATSSV CSANSAERTS NEPARNSKRK FRETESEDPS DEIEEESVGG KKPAHGRGGS 480 KRSRAAEVHN LSERRRRDRI NEKMRALQEL IPNCNKADKA SMLDEAIEYL KTLQLQVLSM 540 GAGMYMQPMM LPPGMSPIHG AHVPHFSPMG AMGLGMGMGM GFGMNMLNMN NSTKMVPFQG 600 PHYPIPGTGP MFQGMPGSNL QAFVHPGQGL PMSMQQTPTV SVPMGSLSKM PIGLNALGVA 660 GSSNATHLAP SSSKKDANPQ VISSMDSNNV NSSMNQATNQ VKMLMPQKLL KLPTETTLRI 720 ADTPDRNLLP ACSGKLQHVI FIECTKVLTS NLFLSVYSQI RCLIRGAPND ENFSAVNS*

Sequence ? help Back to Top

Protein Sequence Length: 779 aa Download sequence

MPMKMVDCII DDGVSVVDSV LSDGLGFARR EVYVVKDTIL VCNMPLTELV RMFKGKVDVT  60
NEVASTSIDP SSRPDTDCVE LIWENGQIMM QGNKARKSTN SNNFQTFGLK SQDGRNGTNC  120
SKMAKFSTMD SVMSDFPMSV PSCEMGLDQD IDLVPWLNYP MEESLHNDYT SDFLNELSGV  180
TINDLPTENH LAYRERKISF HGDGHDNSAS LKHNDTSKDF SSNEKDNRGG SIEVPQFMFP  240
FQQSVPRSGI SDITGSNAGN THHVGSRDSG LNPSSLSAFT SLRLQKLDAG QPSTTSSGFT  300
NFPCFSRPAA LSRANHVSVN PSKRLENGNK RCTLSSSYPA NSTLVNLDSN YSQKELLSHN  360
QSIMAPTNDK SITLPTKPPT EELLSANQPM CREDTAKNQA SQNQVCDSPM SKVGTIGNKI  420
MEPVVATSSV CSANSAERTS NEPARNSKRK FRETESEDPS DEIEEESVGG KKPAHGRGGS  480
KRSRAAEVHN LSERRRRDRI NEKMRALQEL IPNCNKADKA SMLDEAIEYL KTLQLQVLSM  540
GAGMYMQPMM LPPGMSPIHG AHVPHFSPMG AMGLGMGMGM GFGMNMLNMN NSTKMVPFQG  600
PHYPIPGTGP MFQGMPGSNL QAFVHPGQGL PMSMQQTPTV SVPMGSLSKM PIGLNALGVA  660
GSSNATHLAP SSSKKDANPQ VISSMDSNNV NSSMNQATNQ VKMLMPQKLL KLPTETTLRI  720
ADTPDRNLLP ACSGKLQHVI FIECTKVLTS NLFLSVYSQI RCLIRGAPND ENFSAVNS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	493	498	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	7e-37	bHLH family protein