PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62000280-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 349aa    MW: 37822.2 Da    PI: 7.0847
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62000280-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2483.1e-152576155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  AUR62000280-RA 25 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 76
                    57****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MKHMTRQEYV ASLRRKSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ  60
EEAAEAYDIA AIKFRGLNAV TNFEINRYDV KAILDSTTLP IGGAAKRLKD VEELTAAPDK  120
QIIRAIAAVD DHETSQLTNA AYGNGTPNFH SWPGIAFPTA QAQPLAMHYP YAASXXXXXX  180
RLWCKQEVQD TTHDYQDHLN QQLQLNNGTH NFFQMHNLMG LENPSSTLEH TSAGSNPGVY  240
GNGSGNESVG GGGYGLPFGM STVIAHEGNE NGNEKSGYEN YYYYSHQGNN ASNATGVRGA  300
VGTYDQGTSC NNWVPTAIPA LVPRPNNMAA VGGHGGGAIP TFTVWNDT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20840.14e-62AP2 family protein