PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62000210-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HSF
Protein Properties Length: 265aa    MW: 30622.5 Da    PI: 7.9089
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62000210-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind117.21e-36161072102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+++++++sw e++++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgFkkv  ++         weF++++Fkkg+k+ll++
  AUR62000210-RA  16 FLTKTYQLVDDPRTDHIVSWGEDETTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKVVADR---------WEFANEYFKKGEKHLLCE 101
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k+
  AUR62000210-RA 102 IHRRKT 107
                     ****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MVFSVSESQK SVPAPFLTKT YQLVDDPRTD HIVSWGEDET TFVVWRPPEF ARDLLPNYFK  60
HNNFSSFVRQ LNTYGFKKVV ADRWEFANEY FKKGEKHLLC EIHRRKTPQH HHQIHYQDQV  120
LLPQQYLPSP PEEHGSWINI DQSSPLPSPK PSGGPNNDIL TALTEDNQRL RKRNFMLLSE  180
LNHMKTLYND IIYFIQNHVK PAVPNNGNDQ NRPPNYNAMA AAPPKLIELD DQDNQGDASK  240
RETIKLFGVP LQSKKRMHLA EGNL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.11e-91HSF family protein