PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023554807.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 291aa MW: 32846.4 Da PI: 8.2082

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023554807.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.8	4.7e-33	156	213	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCts++C vkk+vers +dp+vv++tYeg+Hnh+ XP_023554807.1 156 EDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCLVKKRVERSYQDPSVVITTYEGQHNHH 213 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MSNEEGKNLY QPYDPFHYNQ LDMNRSIFHQ QHPPLDPALM SFTNFLDTSL DYNSLSRAFD 60 VSCSSSEVIS PVDDVSKNKA SCGGKNLNQS STTQNSSVSS SSNEAVVEED SIKSIKEDPK 120 DEEKSKKQNN ISKKKEKRQR EPRFAFLTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR 180 CTSQKCLVKK RVERSYQDPS VVITTYEGQH NHHCPATLRG HSAGIMSSPF YASAASTSLT 240 APSSGPTLPH ELFSHLLPTN SRADPASGMY QNLSLQMPDH YGLLQDLFTQ K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	135	140	KEKRQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18170.1	2e-48	WRKY family protein