PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023554570.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 482aa MW: 51688.9 Da PI: 8.6607

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023554570.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.7	7.7e-31	241	299	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ XP_023554570.1 241 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDKTILITTYEGNHNHP 299 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MNFFPADDKS RVLLDSKLAS RNRSPTKLDF NVNTGLNLLT TNSSSDQSMV DDGVSPNPED 60 KRAKNERAVL QAELERLKSE NLRLKDMLNQ VTSNYQALQM HLATLIQTQK AADVADPIEE 120 KSVAAQEKVR HGGGCNTNKL VPRQFMDLGL ATNADTDDLS MSSDGRSGEQ SRSPVTTGEV 180 ASAKRHSPDQ ASNWSSNNNN KVPKLGSSSS SSSAKDVDQT ESTMRKARVS VRARSEAPMI 240 TDGCQWRKYG QKMAKGNPCP RAYYRCTMAA GCPVRKQVQR CAEDKTILIT TYEGNHNHPL 300 PPAAMAMAST TSSAARMLLS GSMSSADGLM NPNFLARTLL PCSSSMATIS ASAPFPTVTL 360 DLTQTPNPLF QRPAAGHFPI SFAATPPQSF PQIFGHALYN QSKFSGLQMS KDMEAPPPPP 420 PALQNPLADT LSAASAAIAS DPNFIAALAT AMTSLIGGSH HQKENGNGNS NVDNNTTSNS 480 QQ

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MNFFPADDKS RVLLDSKLAS RNRSPTKLDF NVNTGLNLLT TNSSSDQSMV DDGVSPNPED  60
KRAKNERAVL QAELERLKSE NLRLKDMLNQ VTSNYQALQM HLATLIQTQK AADVADPIEE  120
KSVAAQEKVR HGGGCNTNKL VPRQFMDLGL ATNADTDDLS MSSDGRSGEQ SRSPVTTGEV  180
ASAKRHSPDQ ASNWSSNNNN KVPKLGSSSS SSSAKDVDQT ESTMRKARVS VRARSEAPMI  240
TDGCQWRKYG QKMAKGNPCP RAYYRCTMAA GCPVRKQVQR CAEDKTILIT TYEGNHNHPL  300
PPAAMAMAST TSSAARMLLS GSMSSADGLM NPNFLARTLL PCSSSMATIS ASAPFPTVTL  360
DLTQTPNPLF QRPAAGHFPI SFAATPPQSF PQIFGHALYN QSKFSGLQMS KDMEAPPPPP  420
PALQNPLADT LSAASAAIAS DPNFIAALAT AMTSLIGGSH HQKENGNGNS NVDNNTTSNS  480
QQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-118	WRKY family protein