PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023554503.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

GeBP

Protein Properties

Length: 402aa MW: 45739.2 Da PI: 5.4713

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023554503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	125.5	2.5e-39	177	271	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++rlwse+Dei++LqG+idf++ +g++p+ d+++f ef+kk++s++vsk+ql++K+rrLKkK+k++++k ++g++p+f k+h++++f lskkiWg XP_023554503.1 177 INRLWSEDDEISILQGMIDFQSAKGSDPYTDMSQFLEFIKKNLSVNVSKNQLIDKVRRLKKKYKNNSEKGRNGDDPVFLKQHEHNSFVLSKKIWG 271 68********************************************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MAPKRLVEDL PSAHAFSDSE EESDYETHEE DREIDNLMQN SEDEIDEHTH EDEEEEQQEE 60 QEQAIPSPVI PRRENSLEKD SGFVSDSDSE KTQSSPSASA FTIKPILRKL ACGSSKPNKD 120 SHKSSIDCAT VKPPFSSCLK RPIENNFQGN ESNKKKMKRV MNGEDIEEGK KVCGSGINRL 180 WSEDDEISIL QGMIDFQSAK GSDPYTDMSQ FLEFIKKNLS VNVSKNQLID KVRRLKKKYK 240 NNSEKGRNGD DPVFLKQHEH NSFVLSKKIW GNEAKNKPRK HSVKASNSVS ISSPRVDVEA 300 AKKETVNNNN VESKILAEEF LSEYPWLKAS FMVENGKFCS EGLMRLVRER MPSIGSEKAK 360 ELDDKWRMLG ENELELYVKK VELVREQCKL ILDSMGKAKR GS

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MAPKRLVEDL PSAHAFSDSE EESDYETHEE DREIDNLMQN SEDEIDEHTH EDEEEEQQEE  60
QEQAIPSPVI PRRENSLEKD SGFVSDSDSE KTQSSPSASA FTIKPILRKL ACGSSKPNKD  120
SHKSSIDCAT VKPPFSSCLK RPIENNFQGN ESNKKKMKRV MNGEDIEEGK KVCGSGINRL  180
WSEDDEISIL QGMIDFQSAK GSDPYTDMSQ FLEFIKKNLS VNVSKNQLID KVRRLKKKYK  240
NNSEKGRNGD DPVFLKQHEH NSFVLSKKIW GNEAKNKPRK HSVKASNSVS ISSPRVDVEA  300
AKKETVNNNN VESKILAEEF LSEYPWLKAS FMVENGKFCS EGLMRLVRER MPSIGSEKAK  360
ELDDKWRMLG ENELELYVKK VELVREQCKL ILDSMGKAKR GS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	5e-30	GeBP family protein