PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023554342.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HB-other | ||||||||
Protein Properties | Length: 1365aa MW: 153016 Da PI: 6.4455 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.3 | 6.3e-19 | 19 | 75 | 1 | 57 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + kR t++qle+Le+++ ++yps++ r+eL+ klgL++rq ++WF+ rR k++k XP_023554342.1 19 KTKRKMKTASQLEILEKAYMGEPYPSEALRAELSVKLGLSDRQLQMWFCHRRLKDRK 75 6799***************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1365 aa Download sequence |
MEVSSEGEKK PPPPVEATKT KRKMKTASQL EILEKAYMGE PYPSEALRAE LSVKLGLSDR 60 QLQMWFCHRR LKDRKPPPVK RPRMPSPTMT VAADVNPVGG SGEKNESTSG LGKGSNAYAH 120 PVDVRPGVAV ARIGLNLPSM NRFYGSQQSI AELRAIALVE AQLGEALRED GPILGMEFDP 180 LPPGAFGAPI GVTAVSDDEK KTGQFFEVSK QRDIEQIEHH QMSGRTLHEY QFLPEQPTAK 240 SDEHERDISS YQYGTHANVH SISRTLPMAS GHSFLHGHEQ MSSSYCSQVQ MPNLSIVAQQ 300 SRRSHNLLSS MGEHDNSLCR SSLVNISMNP LYGTHSTAHP EFTSILSDKR VVRGNNVVWI 360 EKKSKNDEAR IAREVEAHEK KMQKELEKQD ALRRKREDQI RKEMERHDRE RRREEERLLR 420 EKQKEEERCL REQRREMLRR EKFLHRESIR AERIRQKEAL RREREAARLK AANQRAAARQ 480 MAKESTELAE DERLELMELA VSSKGLPSIM SLDQETLENL ELFKDMRPNF PPESVQMKRP 540 FPDHPWIESE ANVGNLLMAW KFLVTFAEVL GLWPFTLDEF LQAFHDHDSR LLGEVHIAVL 600 KCIIKDIEDV ARTSSIGLGF NQSSGANPGG GHLRIVEGAY AWGFDICSWQ QHLNPLTWPE 660 ILRQLALSGG LGPQQRKGGN AEPAHHDENE QGNDAADIIS NLRNGLAAEK AVAIMQERGF 720 SNQRKSRHRL TPGTVKFAAF HVLSLEGSKG LNIVEVANKI QKSGLRDLTT SRTPEASIAA 780 ALSRDSKLFE RTAPSTYCVR SPYRKDPGNA DAVLSTARER IRTFKSGILD GDDAERDDGS 840 EVDVPEDAEV HDLGTGGNLT KQHQSPEVCP LDEMTSVASG NGCNEIRDIC KVGMENGGPY 900 TSILDIKGRV KGEESPPVEQ PIYISGICTG QYQEDSTSDE GDHGEPWVQG LTEGEYSDLS 960 VEERLNALCS LIGVALEGNS MRIVLEERLE AANSLKKQML AEAQIDKRRI KEEYVLQIHD 1020 SSSVGNKSEF KTTSSLDATR LSAILNIGEE NREGPLDTGF QQEDCHSSHN NCPSEGLQVQ 1080 DVLVVADNSQ LQHSVVAVEK SRSQVKSYIG HKAEEMYVYR SLPLGQDRRR NRYWQFTSSA 1140 SRNEPGNGRI FVELHNGSWR LIDSPKGFDA LLASLDVRGI RESHLHLMLQ KLEKSFKTAT 1200 RGNILQDSQR TGEDAAGQHC NAHNNGPSST VYADNHDGFE SSTSFRSEAE ETGSDTTESL 1260 KRYLDFESWM RRECFNLSVL SANKHGKKQG TQLLENIGLS WCSSSPLRIR LLKMLLTLIE 1320 VSIPGEAFQP SWTDFERKTW SSKLLSSSSA EDVLQMMHYF VIPQL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 9 | 23 | KKPPPPVEATKTKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44180.1 | 0.0 | HB-other family protein |