PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023554286.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 344aa MW: 38326.2 Da PI: 7.6792

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023554286.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.3	2.7e-31	212	267	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF +a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ XP_023554286.1 212 KQRRCWSPELHRRFENALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 267 79****************************************************97 PP
2	Myb_DNA-binding	44	5.3e-14	214	265	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++ +a +qlGg t+k I + m+ g+t ++ks++qky+ XP_023554286.1 214 RRCWSPELHRRFENALQQLGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 265 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MGSVSDFQPK TITDFLRQIS MLTNAADRTS KLDDLVKNLQ DEMKKIDAFK RELPFCMLLL 60 NDAILALGKP KLVLEDFMSL NRDSSDEEEK EQDCGDKKEW MSSVQLWKTD QLPNAQIKTK 120 RNEGWGYLAA ANKNEERLFV GFKSCSAVKK EEKIESPICA LSFVTPCSKN PREGLVSCVL 180 GSSGNRATST SFVDVRSNLR TVLPQQQSPG RKQRRCWSPE LHRRFENALQ QLGGSQVATP 240 KQIRELMQVD GLTNDEVKSH LQKYRLHTRR VPSTPATQAA GQSPVVLGDL RMSQDGCGES 300 SKVSSSQSAS PQGPLQFNVN GGYSTTRGDG MEDEEDTKSE SYGY

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MGSVSDFQPK TITDFLRQIS MLTNAADRTS KLDDLVKNLQ DEMKKIDAFK RELPFCMLLL  60
NDAILALGKP KLVLEDFMSL NRDSSDEEEK EQDCGDKKEW MSSVQLWKTD QLPNAQIKTK  120
RNEGWGYLAA ANKNEERLFV GFKSCSAVKK EEKIESPICA LSFVTPCSKN PREGLVSCVL  180
GSSGNRATST SFVDVRSNLR TVLPQQQSPG RKQRRCWSPE LHRRFENALQ QLGGSQVATP  240
KQIRELMQVD GLTNDEVKSH LQKYRLHTRR VPSTPATQAA GQSPVVLGDL RMSQDGCGES  300
SKVSSSQSAS PQGPLQFNVN GGYSTTRGDG MEDEEDTKSE SYGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	9e-50	G2-like family protein