PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553915.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 357aa MW: 40181 Da PI: 9.4616

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553915.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.3	3.1e-32	172	225	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_023553915.1 172 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 225 9****************************************************7 PP
2	Myb_DNA-binding	46.9	6.2e-15	173	224	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_023553915.1 173 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 224 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MRMELFPAQP DLSLQISPPN TNKPSSSWIT TPSQEEVDLR FWNNLSLEST KSTPKHPPPP 60 PPPNHHLHRH RHHHHTSAPL FETLNKTRHR PAIFHHDTTS LLNPPPPPPP LPFPGFLQPI 120 RGIPVYHQTI NPSGIGVDGG RGVTPSTVDH RQIMMRSRFL SRFPAKRSMR APRMRWTSTL 180 HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTTD RAAASSGQSD 240 LYENASSGDT SNIEDIIFDI QKPAMGRQNE SLVHQTTRQN PLQDKDYHAL WSNSSREAWL 300 HGLPNDSSRD LSSSLENDTD PKCSNNERLS ERSSSSDDCG GTNSHKPNLE FTLGRPI

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MRMELFPAQP DLSLQISPPN TNKPSSSWIT TPSQEEVDLR FWNNLSLEST KSTPKHPPPP  60
PPPNHHLHRH RHHHHTSAPL FETLNKTRHR PAIFHHDTTS LLNPPPPPPP LPFPGFLQPI  120
RGIPVYHQTI NPSGIGVDGG RGVTPSTVDH RQIMMRSRFL SRFPAKRSMR APRMRWTSTL  180
HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTTD RAAASSGQSD  240
LYENASSGDT SNIEDIIFDI QKPAMGRQNE SLVHQTTRQN PLQDKDYHAL WSNSSREAWL  300
HGLPNDSSRD LSSSLENDTD PKCSNNERLS ERSSSSDDCG GTNSHKPNLE FTLGRPI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	9e-71	G2-like family protein