PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023553750.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 294aa    MW: 31670.8 Da    PI: 5.4089
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023553750.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.14.2e-2974132259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+ ++itY  +Hnh+
  XP_023553750.1  74 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTKLVITYAFDHNHQ 132
                     69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MDRRVRTNPF VSEQEDPEAT SDDGQPESPS DDNDSKPAAG PPPKKRRGVQ KRVVSVPIGD  60
VEGSKSKGEA YPPSDSWAWR KYGQKPIKGS PYPRGYYRCS SSKGCPARKQ VERSRVDPTK  120
LVITYAFDHN HQLPATKSHH HHHNSSPSSA AIAAAPDFSS PGSTTTSSST SSGDHTNTDL  180
SLPAAAKFEE AAAVFASQPE LELGGDSLMI KPCIGDFGWL ADVAYDRILE GPICGGGDIF  240
DDADVMVLST RGDDEDESLF ADLGELPEGS MVFGRRRAVQ PDGPNRTRGR VLDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.12e-60WRKY family protein