PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023553749.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 295aa    MW: 31757.9 Da    PI: 5.4089
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023553749.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.14.2e-2975133259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+ ++itY  +Hnh+
  XP_023553749.1  75 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTKLVITYAFDHNHQ 133
                     69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MDRRVRTNPF VSEQEDPEAT SDDGQPESPS DDNDSKPAAG PPPKKSRRGV QKRVVSVPIG  60
DVEGSKSKGE AYPPSDSWAW RKYGQKPIKG SPYPRGYYRC SSSKGCPARK QVERSRVDPT  120
KLVITYAFDH NHQLPATKSH HHHHNSSPSS AAIAAAPDFS SPGSTTTSSS TSSGDHTNTD  180
LSLPAAAKFE EAAAVFASQP ELELGGDSLM IKPCIGDFGW LADVAYDRIL EGPICGGGDI  240
FDDADVMVLS TRGDDEDESL FADLGELPEG SMVFGRRRAV QPDGPNRTRG RVLDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.13e-61WRKY family protein