PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553728.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 254aa MW: 28812.9 Da PI: 6.5202

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553728.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.1	8.9e-15	77	130	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55 +++ hn+rEr+RR ++ + ++ Lr+llP+ + +skK s +i k+v+YI Lq XP_023553728.1 77 KKEEHNARERQRRMELSQLYFSLRSLLPNaR---RSKKrWSSTTIIDKVVDYIPTLQ 130 6889***********************44...88888************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MAVTPWESYY TLTDENNGEE QTLLPKGGEA LCGEIGGSMG EVAALLGLEE DIYGGLGREN 60 AAFPPAMNAN IEPSNAKKEE HNARERQRRM ELSQLYFSLR SLLPNARRSK KRWSSTTIID 120 KVVDYIPTLQ KEIENMKEKK QKMIKEKGKS NERVLVDEKE GLENDNLSVL VHQVCKGEVI 180 IQICINQRNN MIKFSNLIQK AEEEGLRIIG ASTVCVSPHH PTLTSHLHFQ MDRSVEEGDD 240 YKSILRKRVI SWLC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	107	142	RRSKKRWSSTTIIDKVVDYIPTLQKEIENMKEKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71200.1	9e-21	bHLH family protein