PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553625.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 394aa MW: 43122.3 Da PI: 7.4527

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553625.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.7	1.3e-33	34	88	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_023553625.1 34 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88 79****************************************************8 PP
2	Myb_DNA-binding	72.3	7.2e-23	36	87	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_023553625.1 36 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 87 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MFHPNKKASS MNSHERSGMC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA 60 TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFNDHS IKDGMRASGL EFHRNTASSS 120 NIINRTMNDG NSHMVDAIRM QMEVQRRLHE QLEVQRHLQL RIEAQGKYMQ NILEKACQTL 180 AGENMAVSGG YKAMGGIPNN NNQQGGGGGG IGDMAGGIKD FGSPLGFPSF QDLNLYGGDQ 240 LDLDGFMPHN DSLLCLGKKK PRPPTPTTNY GGSSGKGALD WPDDLRLQDI GMAPPSSCVV 300 EQEDDFKGMD GTLVERDQLE EMYDAKSVVA DEGIGGDHKN NNNNNDDNNN NNNNNNNNAS 360 LKLQRPSPRR AALAVGRANH PLTTAPLTTN SPFG

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MFHPNKKASS MNSHERSGMC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA  60
TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFNDHS IKDGMRASGL EFHRNTASSS  120
NIINRTMNDG NSHMVDAIRM QMEVQRRLHE QLEVQRHLQL RIEAQGKYMQ NILEKACQTL  180
AGENMAVSGG YKAMGGIPNN NNQQGGGGGG IGDMAGGIKD FGSPLGFPSF QDLNLYGGDQ  240
LDLDGFMPHN DSLLCLGKKK PRPPTPTTNY GGSSGKGALD WPDDLRLQDI GMAPPSSCVV  300
EQEDDFKGMD GTLVERDQLE EMYDAKSVVA DEGIGGDHKN NNNNNDDNNN NNNNNNNNAS  360
LKLQRPSPRR AALAVGRANH PLTTAPLTTN SPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-106	G2-like family protein