PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553623.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 396aa MW: 43512.6 Da PI: 7.2125

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.7	1.3e-33	34	88	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_023553623.1 34 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88 79****************************************************8 PP
2	Myb_DNA-binding	72.3	7.2e-23	36	87	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_023553623.1 36 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 87 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MFHPNKKASS MNSHERSGMC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA 60 TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFNDHS IKDASGLEFH RNTASSSNII 120 NRTMNEMQME VQRRLHEQLE VQRHLQLRIE AQGKYMQNIL EKACQTLAGE NMAVSGGYKA 180 MGGIPNNNNQ QGGGGGGIGD MAGGIKDFGS PLGFPSFQDL NLYGGDQLDL DGFMPHNDSL 240 LCLGKKKPRP PTPTTNYGGS SGKGALDWPD DLRLQDIGMA PPSSCVVEQE DDFKGMDGTL 300 VERDQLEEMY DAKSVVADEG IGGDHKNNNN NNDDNNNNNN NNNNNASLKL QRPSPRRAAL 360 AVGRANHPLT TAPLTTNSPF GVDLHYDGRC RPPTYQ

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MFHPNKKASS MNSHERSGMC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA  60
TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFNDHS IKDASGLEFH RNTASSSNII  120
NRTMNEMQME VQRRLHEQLE VQRHLQLRIE AQGKYMQNIL EKACQTLAGE NMAVSGGYKA  180
MGGIPNNNNQ QGGGGGGIGD MAGGIKDFGS PLGFPSFQDL NLYGGDQLDL DGFMPHNDSL  240
LCLGKKKPRP PTPTTNYGGS SGKGALDWPD DLRLQDIGMA PPSSCVVEQE DDFKGMDGTL  300
VERDQLEEMY DAKSVVADEG IGGDHKNNNN NNDDNNNNNN NNNNNASLKL QRPSPRRAAL  360
AVGRANHPLT TAPLTTNSPF GVDLHYDGRC RPPTYQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-106	G2-like family protein