PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553621.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 406aa MW: 44579.8 Da PI: 7.2429

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553621.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.6	1.4e-33	34	88	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_023553621.1 34 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88 79****************************************************8 PP
2	Myb_DNA-binding	72.3	7.5e-23	36	87	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_023553621.1 36 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 87 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MFHPNKKASS MNSHERSGMC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA 60 TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFNDHS IKDASGLEFH RNTASSSNII 120 NRTMNDGNSH MVDAIRMQME VQRRLHEQLE VQRHLQLRIE AQGKYMQNIL EKACQTLAGE 180 NMAVSGGYKA MGGIPNNNNQ QGGGGGGIGD MAGGIKDFGS PLGFPSFQDL NLYGGDQLDL 240 DGFMPHNDSL LCLGKKKPRP PTPTTNYGGS SGKGALDWPD DLRLQDIGMA PPSSCVVEQE 300 DDFKGMDGTL VERDQLEEMY DAKSVVADEG IGGDHKNNNN NNDDNNNNNN NNNNNASLKL 360 QRPSPRRAAL AVGRANHPLT TAPLTTNSPF GVDLHYDGRC RPPTYQ

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MFHPNKKASS MNSHERSGMC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA  60
TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFNDHS IKDASGLEFH RNTASSSNII  120
NRTMNDGNSH MVDAIRMQME VQRRLHEQLE VQRHLQLRIE AQGKYMQNIL EKACQTLAGE  180
NMAVSGGYKA MGGIPNNNNQ QGGGGGGIGD MAGGIKDFGS PLGFPSFQDL NLYGGDQLDL  240
DGFMPHNDSL LCLGKKKPRP PTPTTNYGGS SGKGALDWPD DLRLQDIGMA PPSSCVVEQE  300
DDFKGMDGTL VERDQLEEMY DAKSVVADEG IGGDHKNNNN NNDDNNNNNN NNNNNASLKL  360
QRPSPRRAAL AVGRANHPLT TAPLTTNSPF GVDLHYDGRC RPPTYQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-102	G2-like family protein