PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023553578.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HB-other
Protein Properties Length: 360aa    MW: 39531.2 Da    PI: 7.5045
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023553578.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox19.22.1e-0630742155
                    HSSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHH CS
        Homeobox 21 knrypsaeereeLAkkl..........gLterqVkvWFqNrRake 55
                    +n  p +e    LA+k            ++ +qV +WFqNrR+  
  XP_023553578.1 30 NNTMPAREVLVALAEKFsesverkgkiAVQMKQVWNWFQNRRYAI 74
                    477788888888888888888888888999************865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MGRPPSNGGP AFRFTAPEVA EMDAILQAHN NTMPAREVLV ALAEKFSESV ERKGKIAVQM  60
KQVWNWFQNR RYAIRAKTTK APGKLAVSPI VQIESTPVRN VPQTTVVPAP APVGSAKSAS  120
ENPSLEFEAK SGRDGAWYDV ATFLSHRSVE SGDLEVLVRF SGFGSEEDEW VNIRRNIRPR  180
SFPCESSECV AVLPGDLILC FQEGKEQALY FDAHVLDTQR RRHDVRGCRC RFLVRYDHDQ  240
SEEIVQLRKI CRRPETDYRL QQLHAVNEAA STEPSKSGLD SVLLSGQRIN FEATQKPNAN  300
INVHAQTNTQ EGRSTETNSA PTTLNSGNSA ASSAFSSGIV TSNSVSGLSA DNVSDGKLLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.11e-123HB-other family protein