PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023553550.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 194aa    MW: 21118.9 Da    PI: 9.5797
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023553550.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.70.00174870123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C++ F++   L  H  +H
  XP_023553550.1 48 FECKTCNRQFPSFQALGGHRASH 70
                    89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MMKRERDLES VTTMANCLML LSRSSATTTT ADFESSSSPP SLSPNRVFEC KTCNRQFPSF  60
QALGGHRASH KKPRIDGGNS DGSSSQGSPT KPKTHECSIC GLEFAIGQAL GGHMRRHRAT  120
TLLTDHGRLT NNHHPSSLSP PPRSQPPLVK KTNGGGRILC LDLNLTPSEN DSKFLQLGKS  180
ISMLDCFSEF KVHI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.14e-38C2H2 family protein