PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023553484.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family E2F/DP
Protein Properties Length: 344aa    MW: 38272.8 Da    PI: 6.4156
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023553484.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP86.81.6e-2793175271
         E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     ++++Lr++++k   ++ek+e+ g++++neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  XP_023553484.1  93 SGRGLRQFSMK---VCEKVESkGRTNYNEVADELVAEfadpgnglaspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 175
                     689********...*****999*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MGTRTQQQCR EDNEDDLPSG PGAATISSQS VSMSGSVGSP SSRSDQTMAT PASDKAFLRL  60
NNPDIHGDEA GSQGPIGNVK KKRGQRAVGG DKSGRGLRQF SMKVCEKVES KGRTNYNEVA  120
DELVAEFADP GNGLASPDQQ QYDEKNIRRR VYDALNVLMA MDIISKDKKE IQWKGLPRTS  180
ANDIEELKAE RLGLRKRIEK KAAYLQELEE QYVGLQNLIQ RNEQLFSYEN APSGGVSLPF  240
ILVQTRPHAT VEIEISEDMQ LVHFDFNSTP FELHDDNYVL KAMKFCDRPQ RDDTAQNFTP  300
DGGEGSSMYR PHRTPLPSMS NTPIRTPTSP PLPGIIKARI KHEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-146E2F/DP family protein