PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023553385.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ERF | ||||||||
Protein Properties | Length: 224aa MW: 24382.3 Da PI: 8.0021 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.6 | 8.3e-20 | 25 | 74 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +gr++AeIrd ++ ++r++lg+f++ae+Aa+a+++a+ l+g XP_023553385.1 25 RYRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDNAAITLRG 74 7********.**********883....5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MRRGRGAATA TAAAREAAPP GSERRYRGVR KRPWGRFAAE IRDPWKKTRV WLGTFDSAED 60 AARAYDNAAI TLRGPKAKTN FPLANPISFF DYPPYPHPHP HPHPLNAPDP FLDPRFQINN 120 PHRPTSSSLS STVESFSGPH PPSAAAPTTT TASPSRRYPR TPPLLPEDCH SDCDSSSSVI 180 DDGDDIASSS MIPRKPPLPF DLNIPPSELL DLAADDLGCT ALCL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 3e-22 | ERF family protein |