PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023553344.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | GRAS | ||||||||
Protein Properties | Length: 545aa MW: 60520.4 Da PI: 5.596 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 427 | 1.5e-130 | 176 | 544 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 +e L +cA+a+ ++d+ ++l+++l+ ++s +g+p+qRl ay++eAL ar a+s+++++kal+++e +e l+++++++e++P++kf++l XP_023553344.1 176 KEMLCACARAIGENDMLTGEWLVSELRGMVSVSGEPIQRLGAYLLEALIARTASSGNSICKALRCKEPI---GTEMLSYMHILYEICPYFKFGYL 267 789*****************************************************************9...9********************** PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189 aN aI ea++ge+rvHiiDf+i qG QW++L+qaLa+Rp+gpp++ iTg+++++s + le +g+rL+ +Ae+l vpfef+ +a + +++ XP_023553344.1 268 SANGAIAEAIKGENRVHIIDFQIAQGNQWITLMQALANRPGGPPKVTITGIDDSTSAfaRGGGLEIVGKRLSLLAESLMVPFEFRG-IAGSASEI 361 *****************************************************99889999*************************.6999**** PP GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284 + e+L+v+pgEa+aV++ l lh+++desv ++++rd++L+lvkslsPkvv+vve+e++ n+++F rfl++l+yy+a+f+s++++lpr+++eri+ XP_023553344.1 362 QREDLKVQPGEAIAVSFTLVLHHMPDESVGSQNHRDRILRLVKSLSPKVVTVVEHESNNNTAPFYSRFLQTLKYYTAIFESIDVTLPRDHKERIN 456 *********************************************************************************************** PP GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 vE+++l+r+ivn+vacegaer+erhe l+kWr+r+ +aGFkp pls ++++++++ll+++++ y++ee++g+l+lgW +++Lv+ SaW XP_023553344.1 457 VEQHCLARDIVNIVACEGAERVERHELLGKWRSRFLMAGFKPHPLSPFVNATIEALLKNYSD-KYTLEERDGALYLGWLNQNLVTSSAW 544 *************************************************************5.5************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 545 aa Download sequence |
MQESSRKKVP NQSHRFYEQP PQEPGSCYWP PMNHGGGLYS DDVFEQNHLP SEAFKQYCNL 60 ESSSGTSGYP PQNSSSTASF TSNGSPSSHQ ECHSYSLDPY YSPDNNCGSP ISRSCLTDDA 120 ADDLRHKIRE LETAMLGPDT DGFDIYSVAN PVDPVLPVQE AGWKDVAEIM SRKDLKEMLC 180 ACARAIGEND MLTGEWLVSE LRGMVSVSGE PIQRLGAYLL EALIARTASS GNSICKALRC 240 KEPIGTEMLS YMHILYEICP YFKFGYLSAN GAIAEAIKGE NRVHIIDFQI AQGNQWITLM 300 QALANRPGGP PKVTITGIDD STSAFARGGG LEIVGKRLSL LAESLMVPFE FRGIAGSASE 360 IQREDLKVQP GEAIAVSFTL VLHHMPDESV GSQNHRDRIL RLVKSLSPKV VTVVEHESNN 420 NTAPFYSRFL QTLKYYTAIF ESIDVTLPRD HKERINVEQH CLARDIVNIV ACEGAERVER 480 HELLGKWRSR FLMAGFKPHP LSPFVNATIE ALLKNYSDKY TLEERDGALY LGWLNQNLVT 540 SSAWI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 0.0 | GRAS family protein |