PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023553338.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 462aa MW: 51599.3 Da PI: 7.8468 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.3 | 1.2e-31 | 117 | 174 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d+++++i+Y+g+H+h+k XP_023553338.1 117 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITDIVYKGTHDHPK 174 8****************************************.***************85 PP | |||||||
2 | WRKY | 105.6 | 2.5e-33 | 288 | 346 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct gCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_023553338.1 288 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHD 346 59********************************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 462 aa Download sequence |
MKVDITFVMS DIKWKSYYVS FLMSYMSHRK DEQSCELQVQ GQPQPFTAPP MTKSEINVIS 60 NDSNRSTQMD PVASGAAVPD IDGDDFNHSL NTNTRAQAAQ SDPKGSGSPV VSDRISDDGY 120 NWRKYGQKHV KGSEFPRSYY KCTHPNCEVK KLFERSHDGQ ITDIVYKGTH DHPKLQPSRR 180 YSASASVKDG PDKPSPLTGQ DDRSCSIYTR TVHSIEPNGT PERLAANDSN TEGAGTTLPC 240 KNPDELDDND IILKRRKMEL GGFEACPMVR PIREPRVVVQ TLSEVDILDD GYRWRKYGQK 300 VVRGNPNPRS YYKCTNVGCP VRKHVERASH DPKAVITTYE GKHNHDVPTA KTSSHDAAGP 360 LRTAPLRYRL EDRDTVSLDL GVGIGENRSN EYRQQALAPN GNFNFEVVQE NSAPTYFSVH 420 NRGMNQHGPR ESLSESRSVD VVPLNHSSHP YPPSVGRILT GP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G26640.1 | 1e-143 | WRKY family protein |