PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023553228.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 423aa    MW: 47011.4 Da    PI: 6.9528
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023553228.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.22.2e-30196255159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
  XP_023553228.1 196 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 255
                     58***************************99****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    
MEIDLSLTID QEQEQEHEHE HEQVAASSSR EGLAVDINGG EISVLQMEMD RMKEENKALR  60
RAVEQTMKDY YDLETKIGII QQNNLTNKDS RNFLLFQGNE KKRHDIRNLD LDLEEMSKKK  120
RRARSPTSKE EELKERELGL SLGLHTNNKE DNHKELQEET REKNKPQRPE LLQGMAPPQN  180
RKTRVSVRAR CESATMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCLED  240
MSILITTYEG THNHPLPVGA TAMASTASAA ASFMILDSAN TNPNILNSSS YSPNPNEPSA  300
NSFYSPLMAT SSASDLPHSF FHRSFQPNHL MGSLHGRSWN PTDGNKPPLT AESVSAIASD  360
PKFRVAVAAA ISTLINKESN RTTSMPDPIE RSSSFGSGKD GDGGDGGGGN KNWVVESLSL  420
NGK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101122KKRHDIRNLDLDLEEMSKKKRR
2118122KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.16e-67WRKY family protein