PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023553114.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | SRS | ||||||||
Protein Properties | Length: 249aa MW: 26571.6 Da PI: 6.7628 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 102.3 | 8.3e-32 | 72 | 137 | 4 | 69 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaae 69 + +sCqdCGnqakkdC+h+RCRtCCksrgf C+thvkstWvpa+krrer +++ sk+ +++++ XP_023553114.1 72 KVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTTGGDSKRPRDTHA 137 5589*********************************************98888877777666655 PP | |||||||
2 | DUF702 | 81.8 | 1.8e-25 | 136 | 199 | 94 | 155 |
DUF702 94 aeskkeletsslPeevsseavfrcvrvssvdd..geeelaYqtavsigGhvfkGiLydqGleek 155 + +++ +e+ ++P+ev+s+avfrcvr++++d+ g +++aYqtav+igGh+fkGiLyd+G++++ XP_023553114.1 136 HAASSGFEIGNFPPEVNSTAVFRCVRMTTLDEptGTDQYAYQTAVNIGGHIFKGILYDHGPDQQ 199 44566788999*********************9899*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MAGFFPLGGG GGGSSGGEII HPTDGLLWYK NYESFETEQQ QQGGEGFVYS GENSPARSSL 60 VMVRSGGEGG GKVISCQDCG NQAKKDCVHM RCRTCCKSRG FLCETHVKST WVPASKRRER 120 LIRTTGGDSK RPRDTHAASS GFEIGNFPPE VNSTAVFRCV RMTTLDEPTG TDQYAYQTAV 180 NIGGHIFKGI LYDHGPDQQQ PPISASPDGG ALLITTAESA ALLDPPPSYP APLTSYIPAG 240 TQFFQPPTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75520.1 | 4e-60 | SRS family protein |