PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023553081.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 400aa    MW: 42717.5 Da    PI: 8.9967
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023553081.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.61.1e-055779123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C+k F r  nL+ H r H
  XP_023553081.1 57 FVCEICNKGFQRDQNLQLHRRGH 79
                    89*******************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    
MPTDLETSGE ASISSTGNQP PPPKSAVKKK RNLPGMPDPE AEVIALSPET LLATNRFVCE  60
ICNKGFQRDQ NLQLHRRGHN LPWKLRQRTS KEVKKKVYVC PEPSCVHHHP SRALGDLTGI  120
KKHFCRKHSE KKWKCDRCSK KYAVKSDWKA HSKICGTREY RCDCETVFSR RDSFITHRAF  180
CDALTKEAAV TLSPATAEIP NLESDPQVQP PNCSSPPPTA ASLSATSAAA AAPVAPPSST  240
EAISSISSIQ KKASPGNPPP PLEEAPGKTT VPSTSSSSNA TVLASLFASS AASLSLQPPQ  300
QPGFCDLLRA MARPDREAEI TPPLVFEPLS LCLSNHSEWS LFGAGIQESR PYVPPTPPAM  360
SATGLLQKAA QMGAAAAAST SVFRGFGLSS SSSSAQQGSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50700.11e-121C2H2 family protein