PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552991.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 197aa    MW: 21941.7 Da    PI: 7.5764
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552991.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.53e-17103154155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+++GVr+++ +g+++AeIrdp+      r++lg++++  +Aaka++ a+ +l+g
  XP_023552991.1 103 SHFRGVRRRP-WGKFAAEIRDPTRK--GIRVWLGTYDSDIDAAKAYDCAAFRLRG 154
                     78********.**********8442..4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MASLEEFLSI EFITQFLLVD SSDHQTHFQT DSPFLHSIKL EDFIFDSPIP PSPPPAEGCY  60
NDTKAGEVVD WSTPKTDMSG QASKADAEAS VAGKTDTDRK GRSHFRGVRR RPWGKFAAEI  120
RDPTRKGIRV WLGTYDSDID AAKAYDCAAF RLRGRKAVLN FPLEAGEPDP PAVSGQKRGR  180
GQKWRNIPKA LMAMDEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.17e-40ERF family protein