PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023552917.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 371aa MW: 40518.6 Da PI: 9.6928

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023552917.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.3	6.3e-32	157	210	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_023552917.1 157 PRMRWTTTLHARFVHAVEFLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 210 9****************************************************7 PP
2	Myb_DNA-binding	46.8	6.8e-15	158	209	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ XP_023552917.1 158 RMRWTTTLHARFVHAVEFLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 209 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MELFGGQPDL SLQISPPNSR PTSSIPSHNP LDFLFFNNFP SSSSSNFGPS LSNPNPSHFL 60 HHHLLPTPTN VGGGGGGGGG GVYHRHPHDL HHQGLRFSTP IRGIPVYQNP PSSSSSSSSY 120 PIFGSGGGGG GGVQFNYNGL RSRFLARFPA KRSIRAPRMR WTTTLHARFV HAVEFLGGHE 180 RATPKSVLEL MDVKDLTLAH VKSHLQMYRT VKTTDKAAVG AASSGYDINV GNSEVHDQNR 240 SSRDTSTEDT TYETEKSSRT RLNTPTIDSP RHQLSPSFQD EFRKTVGGEQ DHRRTHTDLP 300 ALWSNSSREA LFQGIIPKDS SQNQPSQLDQ RYLEDKSSSH ERTSDGSSLT NLSAGTSPQK 360 PNLEFTLGIS I

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MELFGGQPDL SLQISPPNSR PTSSIPSHNP LDFLFFNNFP SSSSSNFGPS LSNPNPSHFL  60
HHHLLPTPTN VGGGGGGGGG GVYHRHPHDL HHQGLRFSTP IRGIPVYQNP PSSSSSSSSY  120
PIFGSGGGGG GGVQFNYNGL RSRFLARFPA KRSIRAPRMR WTTTLHARFV HAVEFLGGHE  180
RATPKSVLEL MDVKDLTLAH VKSHLQMYRT VKTTDKAAVG AASSGYDINV GNSEVHDQNR  240
SSRDTSTEDT TYETEKSSRT RLNTPTIDSP RHQLSPSFQD EFRKTVGGEQ DHRRTHTDLP  300
ALWSNSSREA LFQGIIPKDS SQNQPSQLDQ RYLEDKSSSH ERTSDGSSLT NLSAGTSPQK  360
PNLEFTLGIS I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	2e-51	G2-like family protein