PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023552903.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 385aa MW: 41997.8 Da PI: 9.5716

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023552903.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.4	3.7e-39	106	166	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+st+tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+ s XP_023552903.1 106 PDKILPCPRCNSTDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSCS 166 7899******************************************************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MKMGEVEVRD PTIKLFGKTI ALPLNHGGFV SSESSVPKAR QKGISYEELA SQKQGNGSAN 60 QITNQATSEV SENQSEEREI SSPRASKNGE QSETSISPDN KTSKKPDKIL PCPRCNSTDT 120 KFCYYNNYNV NQPRHFCKNC QRYWTAGGTM RNVPVGAGRR KNKSCSSSHL CQFIIPDGGI 180 HHHQFLGKNG TFLTFGSDSS IFNSQNCNQN GDDHSSKSSI TASNSSDRGD KITSQQTTVK 240 NVLPFTPQLQ SFTGHSLPYS SMAPPPFYPT GFPVSYYPVL PYWGCTNPPS PSVINHNAQN 300 SLTNTSVLGK RLKVDDPNEA AKSSIRSTLG IRHEKAAASS IKGGALFASF QQAAKGKEVN 360 HIESWSLLQA NPAAFSRALK FHEIA

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MKMGEVEVRD PTIKLFGKTI ALPLNHGGFV SSESSVPKAR QKGISYEELA SQKQGNGSAN  60
QITNQATSEV SENQSEEREI SSPRASKNGE QSETSISPDN KTSKKPDKIL PCPRCNSTDT  120
KFCYYNNYNV NQPRHFCKNC QRYWTAGGTM RNVPVGAGRR KNKSCSSSHL CQFIIPDGGI  180
HHHQFLGKNG TFLTFGSDSS IFNSQNCNQN GDDHSSKSSI TASNSSDRGD KITSQQTTVK  240
NVLPFTPQLQ SFTGHSLPYS SMAPPPFYPT GFPVSYYPVL PYWGCTNPPS PSVINHNAQN  300
SLTNTSVLGK RLKVDDPNEA AKSSIRSTLG IRHEKAAASS IKGGALFASF QQAAKGKEVN  360
HIESWSLLQA NPAAFSRALK FHEIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	2e-59	Dof family protein