PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552866.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family BES1
Protein Properties Length: 353aa    MW: 38109.2 Da    PI: 8.9927
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552866.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822204.43.3e-6321451150
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r ptw+ErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e+++++g sa asp +s q
  XP_023552866.1   2 TSGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPIERMDVVGGSAAASPFASHQ 96 
                     5899*****************************************************************************************88 PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                             +sp++s ++sp sssfpsp+s++ + + +a  + l+p+l++ls++sss+
  XP_023552866.1  97 --------PSPCASFNPSPGSSSFPSPASSSYVANPNAdgSFLIPWLRNLSSSSSSA 145
                     ........*******************999888776656699********9977764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MTSGTRLPTW RERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTY RKGCKPIERM DVVGGSAAAS PFASHQPSPC ASFNPSPGSS SFPSPASSSY  120
VANPNADGSF LIPWLRNLSS SSSSASSSKL PNLHIHGGSI SAPVTPPLSS PTARTPRLKA  180
DWEDQSVLPG WNAQYYSSLP SSTPPSPGRH VVPNPEWFAG LRIPQGGPNS PTFSLVSXMV  240
LESSISFSYT KGQFTSPFDP LPLSFVGVGY LIAVRRWKXG SRMWTPGQSG TCSPAIAAGS  300
DHTADIPMSE VISEEFAFGS NTAGIVKPWE GERIHEECGS DDLELSLGNS RTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-108BES1 family protein