PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023552563.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NAC | ||||||||
Protein Properties | Length: 679aa MW: 75458.9 Da PI: 6.7868 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.2 | 5.7e-52 | 92 | 219 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp GfrF+Ptd+el+++yL+ k++g++ ++ vi+evd++k+ePwdLp + +k++++ew+fF+++d+ky++g+r +rat +g+Wkatgkd++++ XP_023552563.1 92 LPLGFRFRPTDQELIDYYLRSKINGNHQDV-CVIREVDVCKWEPWDLPdlSILKTKDREWFFFCPQDRKYPNGHRLKRATVAGFWKATGKDRKIK 185 699************************999.88**************96447788999************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++l+g+kktLvfykgrapkg++t+Wv+heyr XP_023552563.1 186 S-GTKLIGMKKTLVFYKGRAPKGKRTNWVVHEYRT 219 *.99*****************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 679 aa Download sequence |
MNNINSRPDA FFILVNYRNK IKKSNSLLVT VFSSFSLKTK SHSLSPLSYS LFIKTKNLSG 60 RPVTSFPLFF FIFANPSPLF SPSMAVLTLN SLPLGFRFRP TDQELIDYYL RSKINGNHQD 120 VCVIREVDVC KWEPWDLPDL SILKTKDREW FFFCPQDRKY PNGHRLKRAT VAGFWKATGK 180 DRKIKSGTKL IGMKKTLVFY KGRAPKGKRT NWVVHEYRTT LKELDGTNPG QNAFVLCRLF 240 KKQDESIEGS NGDEAEAAIS SPTTTESSPG PGDSHSEPIL PLDSPSLQRQ AEISDGVLSE 300 TVEHTDGSVD IHGFDSYNVE FSLQMDPHPD EERKFSGPEN QPLDSKLYSP LHSQLQAELG 360 SSCIYYSDSN YLNYGANPNA EQLQIGAEDF DFIHQMLDSF VYNSDDYALE DQQESMSLSE 420 FPNNSMASLD NRAFGKVEAD NGKALAMPDF ESSICLEDID RKTPIIDHLG TAAPEQGLLY 480 NPSGSLQESY NHLSVVGNTD ASTGIQRMSR RPRSVQQPNE FSTFQGIAPR RLRLQRKLVA 540 PSSCSSNTCS ESSRWQDDDP PSISSKVKKA SENKTTGGDG GSVAATVDVV KQPQAMPDAD 600 SGVGSSKASQ EVSAKLVASD SPTIDFLTGK RRLVTALLPS ILSYVSVVRL VVVALSIIFI 660 SIWKCRNREQ RGYLVSPFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49530.1 | 9e-90 | NAC family protein |