PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552500.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HSF
Protein Properties Length: 522aa    MW: 57291.9 Da    PI: 4.6554
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552500.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.43.6e-36361272102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d++++ ++sws+++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+k+ll++
  XP_023552500.1  36 FLSKTYDMVDDPATDAVVSWSSTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKS 121
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i r+k 
  XP_023552500.1 122 ITRRKP 127
                     ***985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 522 aa     Download sequence    
MDVTANGGDS GLASGSDSSH PTVPAPITNV NAPPPFLSKT YDMVDDPATD AVVSWSSTNN  60
SFVVWNPPEF ARDLLPKYFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANEG FLRGQKHLLK  120
SITRRKPVHG HSQQQSQQSH GQSTSVGACV EVGKFGLEEE VERLKRDKNV LMQELVRLRQ  180
QQQTTDNQLQ TMVQRLQGME QRQQQMMSFL AKAVQSPGFL AQFVQQQNES TRRISEANKK  240
RRLKQDGIVE SEHSTVPDGQ IVKYQPLMNE AAKTMLRQIM KIDTSQSEPV NLNTDSFLIN  300
DGLQSSCAAM DNGNSSSSIS GVTLQEVPLT SGPSSFNSAA SGVAPHGPST AMSEIQSSPQ  360
ATTSDKVSTS PFAVNAVRGP GAREASSLSV SETDVIMPEL SQISEMVSEN IIDVPEVDYR  420
VPEAGNAAFI SPSLLDVDGT IPLEIDSMSP DADIDALLAN SNFWDDLLVQ SPCQEEEIDF  480
MVGGGLPKTN DMQPLENAWD KSRHVDKLTE QMGLLTSEIK RV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1238245NKKRRLKQ
2239244KKRRLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.11e-140HSF family protein