PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023552500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | HSF | ||||||||
Protein Properties | Length: 522aa MW: 57291.9 Da PI: 4.6554 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 115.4 | 3.6e-36 | 36 | 127 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++++ ++sws+++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++ XP_023552500.1 36 FLSKTYDMVDDPATDAVVSWSSTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKS 121 9****************************************************************999.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k XP_023552500.1 122 ITRRKP 127 ***985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 522 aa Download sequence |
MDVTANGGDS GLASGSDSSH PTVPAPITNV NAPPPFLSKT YDMVDDPATD AVVSWSSTNN 60 SFVVWNPPEF ARDLLPKYFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANEG FLRGQKHLLK 120 SITRRKPVHG HSQQQSQQSH GQSTSVGACV EVGKFGLEEE VERLKRDKNV LMQELVRLRQ 180 QQQTTDNQLQ TMVQRLQGME QRQQQMMSFL AKAVQSPGFL AQFVQQQNES TRRISEANKK 240 RRLKQDGIVE SEHSTVPDGQ IVKYQPLMNE AAKTMLRQIM KIDTSQSEPV NLNTDSFLIN 300 DGLQSSCAAM DNGNSSSSIS GVTLQEVPLT SGPSSFNSAA SGVAPHGPST AMSEIQSSPQ 360 ATTSDKVSTS PFAVNAVRGP GAREASSLSV SETDVIMPEL SQISEMVSEN IIDVPEVDYR 420 VPEAGNAAFI SPSLLDVDGT IPLEIDSMSP DADIDALLAN SNFWDDLLVQ SPCQEEEIDF 480 MVGGGLPKTN DMQPLENAWD KSRHVDKLTE QMGLLTSEIK RV |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 238 | 245 | NKKRRLKQ |
2 | 239 | 244 | KKRRLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G32330.1 | 1e-140 | HSF family protein |