PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552348.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YA
Protein Properties Length: 330aa    MW: 36045 Da    PI: 9.1516
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552348.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA98.76e-31162218158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++I++RR+ Rak+  e++l +k+rkpy+heSRh hA+rRpRgsgGrF
  XP_023552348.1 162 DGPIYVNAKQYHGIIRRRKIRAKAMMENRL-AKTRKPYMHESRHLHAMRRPRGSGGRF 218
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MAPQTGYLKE HEGVVPNSLG QLSSSPARLW SGYGQGCQSF FGDFGQVKAS STIQQLGSNG  60
KEFTGTEQAL QVAAHGFEKL NTAPFSIYPG DCKISVDPQK PSPIFSLQSP LSEYHNRFEL  120
GFGQPMVCAN YPYMEQHYGI LSAYAPQIPG RIMLPMSLTT DDGPIYVNAK QYHGIIRRRK  180
IRAKAMMENR LAKTRKPYMH ESRHLHAMRR PRGSGGRFLN TKALKNGKAS MEPKKFEDIN  240
LSDSTGSSQC SVVLQSESGA LNSPNEGKGR GFSLSSSEVS SMLSRGLQQF QINQLGPSMQ  300
SLAEIIDGGG HGMVLPKWVA AVDNCCDLCV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.25e-44NF-YA family protein