PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023552289.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB_related | ||||||||
Protein Properties | Length: 213aa MW: 24479 Da PI: 9.5833 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.4 | 6.8e-13 | 30 | 74 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+ E++++++a++++ + Wk+I + +g +t q++s+ qky XP_023552289.1 30 RESWTEPEHDKFLEAIQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 74 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MALPFDTAAT SLRDDLLKRA RKPYTITKCR ESWTEPEHDK FLEAIQLFDR DWKKIEAFVG 60 SKTVIQIRSH AQKYFLKVEK SGTGEHLPPP RPKRKAARPY PQKTSTNGQV IENNCCSSTD 120 RTTRARFPTK SSVEEHNKLP LRVLPDFGQV YNFIGSVFDP KASDHLQKLK QMDQIDVETV 180 MLLMRNLAIN LTGPDFEDHK KVLSSYDAFM EHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.1 | 5e-83 | MYB_related family protein |