PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023552253.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 431aa MW: 46811.2 Da PI: 7.4437

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023552253.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	114.5	1.5e-35	41	152	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg..... 88 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++++ ++s + ++ ++++s + XP_023552253.1 41 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLMKKAKAAIDELAELPAWHPSTAnasTQRQEQQSL-----Ndvndn 130 79**************************************************************77776444211222222222.....222334 PP TCP 89 .....................k 89 + XP_023552253.1 131 llsvqrdvlnstgnrratvvgS 152 5544444444443333333330 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MEESHRQTST SSRLGMRTGR GGGGGGGEIV EVQGGHIVRS TGRKDRHSKV CTAKGPRDRR 60 VRLSAHTAIQ FYDVQDRLGY DRPSKAVDWL MKKAKAAIDE LAELPAWHPS TANASTQRQE 120 QQSLNDVNDN LLSVQRDVLN STGNRRATVV GSDSRVSEFP RQNLQHTRMG EGPNSSTSSF 180 LPPSLDSDSI ADTIKSFFPI GTAAETTSSS IQFQNYPQDL LSRTSSQNQD LRLSLQSFQD 240 PIAIHRHHAQ HQSQGHQNEH VLFSGTSPLS GFDVTTAGWS EHNLNPGEIS RFPRITWNAS 300 GAETGSGGGT SHGGAGIRST GYVFNSPQLP TALLPSQLMQ PLIGENQFFS QRGPLQSSHT 360 PSIRAWIDPS LTATDHQQHQ IPPSIHQSSY TGLGFATGGF SGFHIPTRIQ GEEEHDGISD 420 KPSSASSDSR H

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MEESHRQTST SSRLGMRTGR GGGGGGGEIV EVQGGHIVRS TGRKDRHSKV CTAKGPRDRR  60
VRLSAHTAIQ FYDVQDRLGY DRPSKAVDWL MKKAKAAIDE LAELPAWHPS TANASTQRQE  120
QQSLNDVNDN LLSVQRDVLN STGNRRATVV GSDSRVSEFP RQNLQHTRMG EGPNSSTSSF  180
LPPSLDSDSI ADTIKSFFPI GTAAETTSSS IQFQNYPQDL LSRTSSQNQD LRLSLQSFQD  240
PIAIHRHHAQ HQSQGHQNEH VLFSGTSPLS GFDVTTAGWS EHNLNPGEIS RFPRITWNAS  300
GAETGSGGGT SHGGAGIRST GYVFNSPQLP TALLPSQLMQ PLIGENQFFS QRGPLQSSHT  360
PSIRAWIDPS LTATDHQQHQ IPPSIHQSSY TGLGFATGGF SGFHIPTRIQ GEEEHDGISD  420
KPSSASSDSR H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	3e-86	TCP family protein