PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552129.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 350aa    MW: 39483 Da    PI: 6.3759
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552129.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.3e-1754103255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +gr++AeIrdp     +   r +lg+f+t eeAa+a++ a+++++g
  XP_023552129.1  54 RYRGVRRRP-WGRYAAEIRDP-----HskERRWLGTFDTGEEAARAYDCAARAMHG 103
                     59*******.**********6.....335999**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MEEALRRLRG MPVKQSHSDD AVLCHVNHRK KSTSSAPNAD RRVIREGSSS GTMRYRGVRR  60
RPWGRYAAEI RDPHSKERRW LGTFDTGEEA ARAYDCAARA MHGLKARTNF VYPSTPSSTY  120
SLSDQLLSPL NFGKQSLITR HPPPPSTWST FSNSHTFDFQ EPAPQRITPP SFLDMLLPLD  180
IHPSSNPNFV SSTPRFPLVD DNFHCPKPSF TNLPIVENLE NPNVNEDMLR DSEFIPKEPS  240
DSGLLEEIIH GFFPKPSNKP QNSHLSDDMS SIPSDTNFPH SNFVDEQQTG ILYNYQTGPV  300
QLGFSAEEIS FVNGLPMNMQ MGIESLNSTM ENFPEYPDYL SAFAAKVYNT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.16e-16ERF family protein