PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023552101.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 232aa MW: 24407.7 Da PI: 5.6408 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19.8 | 2.1e-06 | 129 | 150 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC C+k+F+++ L H+r+H XP_023552101.1 129 KCATCNKVFKSWKALFGHLRSH 150 7********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MEKNTNANAN ANINVDADIN TVPESTSPDQ RHGRETSPMA VSPPPASIDD NSPTPPVINL 60 SSVAPAPERA TTGDVGTSSS SSTHGHVGGG SNKEVGKKRG RGDGGEQQQQ VKAAKKKGEL 120 TEVPKGDPKC ATCNKVFKSW KALFGHLRSH PERTYRGALP PPTAAELDIR HCQQQFASTL 180 LTVAQGVAAS RRGLDIDLNQ PSAAEESESP EKSGGVGFDL NVEQPPESDN DE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 96 | 102 | GKKRGRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35700.1 | 2e-14 | C2H2 family protein |