PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023552025.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WOX

Protein Properties

Length: 277aa MW: 31776.4 Da PI: 6.3751

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023552025.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	68.9	6.4e-22	100	160	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ Fe+ n +ps+++++e++++l +++e++V++WFqNrRa+ k+ XP_023552025.1 100 RQRWTPTPVQLQILERIFEQgNGTPSKQKIKEITSELgqhgQISESNVYNWFQNRRARSKR 160 89***************99************************************97 PP
2	Wus_type_Homeobox	100	1.8e-32	99	162	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtPtp Q++iLe+++++G tP+k++i++it+eL ++G+i++ NV++WFQNr+aR+++kq XP_023552025.1 99 SRQRWTPTPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQ 162 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MMEWEKAEHQ TPYHHQNPPL RDDHLHHLTG TTAGALYVKV MTDEQLETLR KQIAVYATIC 60 EQLVEMHKTL TAHQDLTGMR LGNMYCEPLM TSSSHKITSR QRWTPTPVQL QILERIFEQG 120 NGTPSKQKIK EITSELGQHG QISESNVYNW FQNRRARSKR KQQSTTPAYG ESEVETEVES 180 PKDKKTKPVD FQTHQTSAPL GEDMCFQSPE MSSELHFLDP NTNKADTLFS NGSLKSARSF 240 SQMSFYEGNE QLTGKIETPE NYSLYQQAEG YSMTERP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	154	162	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	1e-88	WOX family protein