PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023552024.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WOX | ||||||||
Protein Properties | Length: 278aa MW: 31847.5 Da PI: 6.3751 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 68.9 | 6.4e-22 | 100 | 160 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ Fe+ n +ps+++++e++++l +++e++V++WFqNrRa+ k+ XP_023552024.1 100 RQRWTPTPVQLQILERIFEQgNGTPSKQKIKEITSELgqhgQISESNVYNWFQNRRARSKR 160 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 100 | 1.8e-32 | 99 | 162 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtPtp Q++iLe+++++G tP+k++i++it+eL ++G+i++ NV++WFQNr+aR+++kq XP_023552024.1 99 SRQRWTPTPVQLQILERIFEQGNGTPSKQKIKEITSELGQHGQISESNVYNWFQNRRARSKRKQ 162 789***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MMEWEKAEHQ TPYHHQNPPL RDDHLHHLTG TTAGALYVKV MTDEQLETLR KQIAVYATIC 60 EQLVEMHKTL TAHQDLTGMR LGNMYCEPLM TSSSHKITSR QRWTPTPVQL QILERIFEQG 120 NGTPSKQKIK EITSELGQHG QISESNVYNW FQNRRARSKR KQQSTTPAYG ESEVETEVES 180 PKDKKTKPVD FQTHQTSAPL GEDMCFQSPE MSSELHFLDP NTNKADTLFS NGSLKSARSF 240 SQMSFYEAGN EQLTGKIETP ENYSLYQQAE GYSMTERP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 154 | 162 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 2e-88 | WOX family protein |