PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023551975.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 302aa    MW: 35527.8 Da    PI: 6.5155
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023551975.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM178.12.4e-5571291129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     +ppGfrFhPtdeelv++yL+kk+++++++l +vik+vd+yk+ePwdL+    ++++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++s 
  XP_023551975.1   7 VPPGFRFHPTDEELVDYYLRKKISSRRIDL-DVIKDVDLYKIEPWDLQ----EDQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKTIYS- 95 
                     69****************************.9***************7....5778**************************************. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                     k+ l+g++ktLv+ykgrap+g+k+dW+mheyrle
  XP_023551975.1  96 KHDLIGMRKTLVYYKGRAPNGQKSDWIMHEYRLE 129
                     8899****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MNTFLDVPPG FRFHPTDEEL VDYYLRKKIS SRRIDLDVIK DVDLYKIEPW DLQEDQNEWY  60
FFSHKDKKYP TGTRTNRATA AGFWKATGRD KTIYSKHDLI GMRKTLVYYK GRAPNGQKSD  120
WIMHEYRLET DENGAPQQEG WVVCRVFKKR IATVNRRMNE HESPCWYDEP MAAIMPDLDS  180
PSFPQHLSNY FPCKKEMDLT NYQPQQHFLH LPLLESQKLV QSASNYQPSP PKQQLSDQNL  240
LFLFDNNNNN NEQTADQLTD WRVFDKYVAS QLSQENASKQ ELIVPQNAPT STSTSCQIEL  300
WK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62700.11e-92NAC family protein