PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023551796.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 318aa    MW: 34914.9 Da    PI: 6.5037
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023551796.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.53.7e-18239273135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs+Cg+ kTp+WR gp g kt+CnaCG+++++ +l
  XP_023551796.1 239 CSHCGVQKTPQWRTGPLGAKTVCNACGVRFKSGRL 273
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MECVDGALEI LQLSPQLCFR DNGCFNHQNL PTSDDFFVDQ LLDFSNDDQF VQDQTPDEDE  60
HDHDDSVSLS GREIHQNSIV SDHPSLPSGE LTVPVDDLAD LEWLSHFVED SFSGFSASFP  120
SAGISSLVKS SKDSAAVDNQ PSNGGSISPP ENCFKTPIPV KARTKRTRTG GRVWCLASPS  180
LTESSSSSTT SSSSSSSPAS PWLILPDRFE PEIPKKKPRR KSLSEKPKTN VGAQPPRRCS  240
HCGVQKTPQW RTGPLGAKTV CNACGVRFKS GRLLPEYRPA CSPTFSSELH SNHHRKVLEM  300
RRKKEIAAPA ELLTLEQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.25e-55GATA family protein