PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023551467.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ERF | ||||||||
Protein Properties | Length: 231aa MW: 24745.9 Da PI: 4.4434 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.3 | 1.6e-17 | 59 | 108 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+G+r ++ +g+Wv+eIr+p++ +kr++lg+f t+e+Aa+a++ a+++l+g XP_023551467.1 59 SLYRGIR-CR-SGKWVSEIREPRK---TKRIWLGTFPTPEMAAAAYDVAALALRG 108 579***9.55.6*********843...5*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MGDQKLPMNE LSPTPVDPLV PSVPTSQSPN PNTQAAAPQA LPQELPPPPP SSSSTKKHSL 60 YRGIRCRSGK WVSEIREPRK TKRIWLGTFP TPEMAAAAYD VAALALRGDD AVLNFPASIP 120 SYPIPASTSP IDIRTAASTA AAASAANTLK KVEGTRSNIE DTKIITVEDC SNTTLLKTEE 180 FVDEEEIFGM PSLLADMAEG MMVSPPRINS PPPSDDSIEN SDGTESLWSY L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 1e-37 | ERF family protein |