PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023551454.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 254aa MW: 28690.3 Da PI: 6.9878 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.7 | 4.7e-09 | 139 | 186 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L++l+P + k + a +L ++YI+sLq XP_023551454.1 139 SHSLAERVRREKINQRLRFLQDLVPGC----YKTMGMAVMLDVIINYIQSLQ 186 8*************************9....356999**************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MKGHQWRLLP LQKQTLYKAC FCRAMGYNDL EMISNHFTVD SSNESDHYQG TIMSSANPFF 60 TDTFCFEKFD HFHETPSCVA PTAALCSSAP ANYSSFPAFN TEGSKSSGGR KRKSKNEGDE 120 EKPKGVIHVR AKRGQATDSH SLAERVRREK INQRLRFLQD LVPGCYKTMG MAVMLDVIIN 180 YIQSLQNQIE FLSMKLSVAS RYYDFNNSSE TDEIEIMQAT NGCGYMEEMG GRVVVREEEG 240 NGGSFYHHST LPPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25330.1 | 3e-49 | bHLH family protein |