PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023551430.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 229aa    MW: 25667.7 Da    PI: 4.5245
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023551430.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91.1e-1766116155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  + +Wv+e r+p   +k++r++lg++ tae+Aa+a++ a+++l+g
  XP_023551430.1  66 PVYRGVRRRN-NDKWVCEMREP---NKKTRIWLGTYPTAEMAARAHDVAALALRG 116
                     68*****887.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MDLFSQFSDP LPYYGNCNYN SESSSPFFDA GTHPLTVATS DEEVILASNQ PKRPAGRRVF  60
KETRHPVYRG VRRRNNDKWV CEMREPNKKT RIWLGTYPTA EMAARAHDVA ALALRGKSAC  120
LNFADSAWRF PIPASDDPSV IRAAAAMAAN ECKDEECNAC REEDDVVLCQ PTASPDRPVY  180
VDDEALSNMP MLLANMAEGL LLSPPSFWVN DDVEWDDVAM SHDVSLWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.17e-58ERF family protein