PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023551415.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ERF | ||||||||
Protein Properties | Length: 307aa MW: 33735.9 Da PI: 8.091 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.8 | 2.8e-18 | 106 | 156 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p + r r++lg+++++e Aa a++ a+ kl+ge XP_023551415.1 106 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDSPEAAAYAYDCAACKLRGE 156 59******9.**********954...5**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MNTMMNRADL QFQLTDVSTA LSNLILTGGG NTLDSIFSHC ENLASMNDGG DFDRPVGSSV 60 YLQQREVLKR FSQDSKQNGS RGLFSRAYEL LYSRSGAAVG GGERKLYRGV RQRHWGKWVA 120 EIRLPQNRMR VWLGTYDSPE AAAYAYDCAA CKLRGEYARL NFPNLKELKT DLGAGEFARL 180 SGLKKLVDAK IQAIFQKIRK GKGKKSVKKN DSQRTGGDLS SGSCSSSSSS SVSLPPAAVE 240 LTDEWSWERV QPPIAAEEGL WNFENSPPDV STDCATATAT AGLETECYSL AKMPSYDAEL 300 IWEVLAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64380.1 | 7e-44 | ERF family protein |