PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023551341.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 200aa    MW: 21556.8 Da    PI: 6.5044
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023551341.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.00045678123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C++C + F +   L  H++ H
  XP_023551341.1 56 YECQYCYREFANTQALGGHQNAH 78
                    99*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MAALEEHYQS KQTNNPTTRL KLFGFDVQED LEDDSTPTPS ASSDSGAAPS SGDRKYECQY  60
CYREFANTQA LGGHQNAHKK ERQQHKRAQL QASRNATVFR NPIVSAFAPP PHLLPSAVLT  120
SSSSWPPVYM PQAPPQFQVS HGCVFTPPPP PPAFFSTGSR SAHGIVDGPS LSRFSTVEDG  180
PGFDDGPGLD LHLSLAPSAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.18e-14C2H2 family protein