PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023551274.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 336aa    MW: 37122.9 Da    PI: 4.7168
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023551274.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY66.44.5e-21178230259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      D ++WrKYGqK++kgs++p      +s+gC ++k+vers+ dp+ ++itY+geH h+
  XP_023551274.1 178 TDMWAWRKYGQKPIKGSPYPS-----SSKGCGARKQVERSNADPESFIITYTGEHIHP 230
                     69****************997.....599****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MAAGNNDWDL SAVVRSCNSA AYRTTPTATA ATETDLSCLA SLTFDDDPND VAFSFPDILQ  60
PQQQEQQQHN GFDELHQAIC FLPNSLTAAV TIAPEIPTAT TNRYFQEEFT PILPQPDPVE  120
AAETAAALQN QHHHQIQPSF PPEFPNSSMV QSNIPKSRKR KNQQKRTVCH VTADNLSTDM  180
WAWRKYGQKP IKGSPYPSSS KGCGARKQVE RSNADPESFI ITYTGEHIHP RPTHRNCLAG  240
SSRNRPLSSV TNKNPTGDPN QSLITTALVG SGSSPADSPM TPFNDDYGGG DEKEGEMFED  300
MAIDSDDDYD DILIPNLMVR DEIFAGFDEI RRRRPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-48WRKY family protein