PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023551233.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 252aa MW: 28195.1 Da PI: 7.5018 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.1 | 0.0012 | 141 | 162 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC++C+k F++ L +H + + XP_023551233.1 141 KCGKCTKLFRSYRALFSHEKIC 162 7*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MESHICKLCF KSLANGKAYA AHMKAHLTAT MAPPLPPPTP PETHGGVPSS FSSYSADDDE 60 FREDPKRIFN ILLQETESET ESTNPSRKRS KKYRKPPLEP SSSVSDTSPE EDLAMSLMML 120 SRDRWMKPET KSLKGIKRKK KCGKCTKLFR SYRALFSHEK ICQLETELDE EQEEHEELKN 180 GGTRRVFKCP FCFKLFGSGQ ALGGHKRSHV LSSENAAVSV NASVSLKLEI SLIDLNLPAP 240 IEEDDYSVVS DA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60580.1 | 2e-29 | C2H2 family protein |