PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023551168.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GRAS
Protein Properties Length: 446aa    MW: 49071 Da    PI: 5.1965
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023551168.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2838.8e-8712443172373
            GRAS  72 knsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetg 162
                     ++ +++laa++l++e+sP++kf+h+taNqaIleav+ ++rvHi+D++i++G+QW++L+qaL sR+++pp  +lRiT++++  s+     +++etg
  XP_023551168.1 124 HSPTDVLAAFQLLQEMSPYVKFGHFTANQAILEAVADDRRVHIVDYNIMEGIQWASLMQALVSRKDSPPapHLRITAISRGPSSrrWIGTVQETG 218
                     3478999**********************************************************554444********96555567789***** PP

            GRAS 163 erLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse...sFl 254
                     +rL  fA+++g pf+f+    ++ e+++++ L++ +gEal+Vn+vl+l ++ +   ++++ +d++L   k+l+P++v++ve+e++h+ +   ++ 
  XP_023551168.1 219 RRLVAFAASIGQPFSFHQCKLDSDESFRPSGLKLVRGEALVVNCVLHLPHFSN---TSPESIDSFLAGAKTLNPRLVTLVEEEIEHGPTidgDYK 310
                     ******************9999*****************************83...3334467***********************744444*** PP

            GRAS 255 erflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerre..rhetlekWrerleeaGFkpvplsekaakqaklllrkvksd 347
                      +fl++le ysa++dslea++p ++++r  vE+++lg++i+  +   g+ +r+    e+  +W erle++G+k++++s  + +qa+ll+  ++ d
  XP_023551168.1 311 VQFLDSLERYSAIYDSLEAGIPMKNRARGLVEKVFLGPRISATLKRIGQPQRAatAAEENCSWGERLEKMGLKAAAISFANHCQARLLVDLFN-D 404
                     *********************************************99988554114577789*******************************.* PP

            GRAS 348 gyrveee.sgslvlgWkdrpLvsvSaW 373
                     gyrvee  s+ lvlgWk+++L+svS W
  XP_023551168.1 405 GYRVEELgSNKLVLGWKSKRLLSVSIW 431
                     *****987999**************** PP

Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    
MAMAVDNAFN GVAVSDYSTS TNNSDDDFHD LFDSIMSIDA LPYSPQVVEV DGGTNCNSPS  60
NPAEDREEEE EEFKSLRLYH LLMAVADAMF GDHKSRDLAQ DLLDYAAVSG GGSNKPHHLH  120
RDDHSPTDVL AAFQLLQEMS PYVKFGHFTA NQAILEAVAD DRRVHIVDYN IMEGIQWASL  180
MQALVSRKDS PPAPHLRITA ISRGPSSRRW IGTVQETGRR LVAFAASIGQ PFSFHQCKLD  240
SDESFRPSGL KLVRGEALVV NCVLHLPHFS NTSPESIDSF LAGAKTLNPR LVTLVEEEIE  300
HGPTIDGDYK VQFLDSLERY SAIYDSLEAG IPMKNRARGL VEKVFLGPRI SATLKRIGQP  360
QRAATAAEEN CSWGERLEKM GLKAAAISFA NHCQARLLVD LFNDGYRVEE LGSNKLVLGW  420
KSKRLLSVSI WASSSLSSSS SSSDSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-128GRAS family protein