PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023550985.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ZF-HD
Protein Properties Length: 311aa    MW: 34121.2 Da    PI: 8.5087
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023550985.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer105.43.4e-3369125358
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58 
                      v YkeClkNhAaslG+ha+DGCgEfmps++++  ++++l+CaACgCHRnFHRr++e
  XP_023550985.1  69 VVSYKECLKNHAASLGAHALDGCGEFMPSPSASsIDPTSLNCAACGCHRNFHRRDPE 125
                     589**************************9999889******************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MFREVCAFQR AMDLALPPIT TTTTANTTKS PDPDSDTPTR FPPSSSAKSL PFTNGLLKRH  60
NHAHQPTLVV SYKECLKNHA ASLGAHALDG CGEFMPSPSA SSIDPTSLNC AACGCHRNFH  120
RRDPEDPIST LPINTATTHV IEYQPHHRHH PPPPGMRSPN SASPPPISSS YYPSAPHMLL  180
ALSAGLSARP PEIGRAKNLN ARKRFRTKFS NEQKEKMLHF AEQVGWKMQK RDEDLVRNFC  240
NQIGVERGVL KVWMHNNKNT MGKKTDSNDT TPTPTTTTTT AVVNINNNDD EDEPDGGFHM  300
HIGSNGSSSS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.19e-69ZF-HD family protein