PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023550900.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 353aa MW: 38545.8 Da PI: 8.7668

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023550900.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	117.3	6.1e-37	69	129	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+ lkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGa+r vPvGgg+r++ k+s XP_023550900.1 69 PEAGLKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGAMRSVPVGGGCRRSSKRS 129 67889**************************************************998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MVFSSVPVFL DPPNWPSQQP NQLQPSSCEA NNAQHLPPPP PPAAGGGGPG SIRPGSMTDR 60 ARLAKIPQPE AGLKCPRCES TNTKFCYFNN YSLTQPRHFC KTCRRYWTRG GAMRSVPVGG 120 GCRRSSKRSK GGSNRSKSPG GSSTSTSTVS SNSCTTDILS HQLAHPPPPP PPPPPPTHFP 180 FLGQNLQHLS DFGNLGLNFE ALQIPSMASS AGESSILSSG ITDHHQWKIP FFANLHQQNG 240 LYSNFMAEEH HHQHQHQHQH QAQAADFSNY QRLSKPLMDT GFSSSTPHHQ LGNINNNTMK 300 IMEETQGIHN LSRNFLGIQP NDPFWNSTTS TTTTTTTTPG NTAWSTDQIS DLL

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MVFSSVPVFL DPPNWPSQQP NQLQPSSCEA NNAQHLPPPP PPAAGGGGPG SIRPGSMTDR  60
ARLAKIPQPE AGLKCPRCES TNTKFCYFNN YSLTQPRHFC KTCRRYWTRG GAMRSVPVGG  120
GCRRSSKRSK GGSNRSKSPG GSSTSTSTVS SNSCTTDILS HQLAHPPPPP PPPPPPTHFP  180
FLGQNLQHLS DFGNLGLNFE ALQIPSMASS AGESSILSSG ITDHHQWKIP FFANLHQQNG  240
LYSNFMAEEH HHQHQHQHQH QAQAADFSNY QRLSKPLMDT GFSSSTPHHQ LGNINNNTMK  300
IMEETQGIHN LSRNFLGIQP NDPFWNSTTS TTTTTTTTPG NTAWSTDQIS DLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	123	129	RRSSKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02460.1	1e-36	Dof family protein